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Review Papers

[1]. Wang J, Zuo XN, He Y. Graph-based network analysis of resting-state functional MRI. Front Syst Neurosci. 2010 Jun 7;4:16.

Applications (Healthy People)

[14]. Zhang L, Li W, Wei D, Yang W, Yang N, Qiao L, Qiu J, Zuo XN, Zhang Q*. The association between the brain and mind pops: A voxel-based morphometry study in 256 Chinese college students. Brain Imaging and Behavior. 2016; 10(2): 332-341.

[13]. Wei GX*,Yue XL, Li YF, Zuo XN. Tai Chi Chuan modulates heart rate variability during abdominal breathing in old adults. PsyCh J. 2016; 5(1): 69-77.

[12]. Zhao T, Cao M, Niu H, Zuo XN, Evans A, He Y, Dong Q, Shu N*. Age-related changes in the topological organization of the white matter structural connectome across the human lifespan. Hum Brain Mapp. 2015; 36(10):3777-3792.

[11]. Zou QH, Ross TJ, Gu H, Geng X, Zuo XN, Hong LE, Gao JH, Stein EA, Zang YF, Yang Y. Intrinsic resting-state activity predicts working memory brain activation and behavioral performance. Hum Brain Mapp. 2013; 34(12):3204-3215.

[10]. Zhao K, Chen YX, Yan WJ, Zuo XN, Fu XL*. Amygdala volume predicts inter-individual differences in fearful face recognition. PLoS ONE. 2013; 8(8):e74096.

[9]. Wei GX, Xu T, Fan FM, Dong HM, Jiang LL, Li HJ, Yang Z, Luo J*, Zuo XN*. Can Taichi reshape the brain? A brain morphometry study. PLoS ONE. 2013; 8(4): e61038.

[8]. Wang DY, Han XJ, Li SF, Liu DQ, Yan CG, Zuo XN, Zhu CZ, He Y, Kiviniemi V, Zang YF. Effects of apolipoprotein E genotype on the off-line memory consolidation. PLoS One. 2012; 7(12): e51617.

[7]. Zhang G, Yin H, Zhou YL, Han HY, Wu YH, Xing W, Xu HZ, Zuo XN. Capturing amplitude changes of low-frequency fluctuations in functional magnetic resonance imaging signal: A pilot acupuncture study on NeiGuan (PC6). J Altern Complement Med. 2012; 18(4):387-93.

[6]. Adelstein JS, Shehzad Z, Mennes M, DeYoung CG, Zuo XN, Kelly C, Margulies DS, Bloomfield A, Gray JR, Castellanos FX, Milham MP. Personality is reflected in the brain's intrinsic functional architecture. PLoS ONE. 2011; 6(11): e27633.

[5]. Koyama MS, Di Martino A, Zuo XN, Kelly C, Mennes M, Jutagir DR, Castellanos FX, Milham MP. Resting-state functional connectivity indexes reading competence in children and adults. J Neurosci. 2011 June 8;31(23):8617-8624.

[4]. Mennes M, Zuo XN, Kelly C, Di Martino A, Zang YF, Biswal B, Castellanos FX, Milham MP. Linking inter-individual differences in neural activation and behavior to intrinsic brain dynamics. Neuroimage. 2011 Feb 14;54(4):2950-59.

[3]. Mennes M, Kelly C, Zuo XN, Di Martino A, Biswal BB, Castellanos FX, Milham MP. Inter-individual differences in resting-state functional connectivity predict task-induced BOLD activity. Neuroimage. 2010 May 1;50(4):1690-701. [Editor's Choice Award]

[2]. Yan C, Liu D, He Y, Zou Q, Zhu C, Zuo XN, Long X, Zang Y. Spontaneous brain activity in the default mode network is sensitive to different resting-state conditions with limited cognitive load. PLoS One. 2009 May 29;4(5):e5743.

[1]. Zou Q, Long X, Zuo XN, Yan C, Zhu C, Yang Y, Liu D, He Y, Zang Y. Functional connectivity between the thalamus and visual cortex under eyes closed and eyes open conditions: a resting-state fMRI study. Hum Brain Mapp. 2009 Sep;30(9):3066-78.

Applications (Clinical Population)

[10]. Peng ZW, Xu T, He QH, Shi CZ, Wei Z, Miao GD, Jing J, Lim KO, Zuo XN*, Chan RCK*. Default network connectivity as a vulnerability marker for obsessive-compulsive disorder. Psychol Med. 2014; 44:1475-1484.

[9]. Zhou Y, Wang Z, Zuo XN, Zhang H, Wang Y, Jiang T, Liu Z*.Hyper-coupling between working memory task-evoked activations and amplitude of spontaneous fluctuations in first-episode schizophrenia. Schizophr Res. 2014; 159(1):80-89.

[8]. Zheng G, Wen J, Zhang L, Zhong J, Liang X, Ke W, Kong X, Zhao T, He Y, Zuo X, Luo S, Zhang LJ*, Lu GM*. Altered brain functional connectivity in hemodialysis patients with end-stage renal disease: a resting-state functionalMR imaging study. Metab Brain Dis. 2014; 29(3):777-86.

[7]. Zhou YX, Lui Y, Zuo XN, Milham MP, Reaume J, Grossman RI, Ge YL*. Characterization of thalamocortical association using amplitude and connectivity of fMRI in mild traumatic brain injury. J Magnetic Res Imag. 2014; 39(6):1558-68. (Cover Paper)

[6]. Fan FM, Tan SP, Yang FD, Tan YL, Zhao YL, Chen N, Li BB, Song CS, Wang YH, Jin Z, Zhou DF, Milham MP, Zou YZ, Zuo XN. Ventral medial prefrontal functional connectivity and emotion regulation in chronic schizophrenia: A pilot study. Neurosci Bull. 2013; 29(1):59-74.

[5]. Sun L, Cao Q, Long X, Sui M, Cao X, Zhu C, Zuo X, An L, Song Y, Zang Y, Wang Y. Abnormal functional connectivity between the anterior cingulate and the default mode network in drug-naive boys with attention deficit hyperactivity disorder. Psychiatry Res. 2012; 201(2):120-7.

[4]. Di Martino A, Kelly C, Grzadzinski R, Zuo XN, Mennes M, Mairena MA, Lord C, Castellanos FX, Milham MP. Aberrant striatal functional connectivity in children with autism. Biol Psychiatry. 2011 May 1;69(9):847-56.

[3]. Dickstein DP, Gorrostieta C, Ombao H, Goldberg LD, Brazel AC, Gable CJ, Kelly C, Gee DG, Zuo XN, Castellanos FX, Milham MP. Fronto-temporal spontaneous resting state functional connectivity in pediatric bipolar disorder. Biol Psychiatry. 2010 Nov 1;68(9):839-46.

[2]. Hoptman MJ, Zuo XN, Butler PD, Javitt DC, D'Angelo D, Mauro CJ, Milham MP. Amplitude of low-frequency oscillations in schizophrenia: a resting state fMRI study. Schizophr Res. 2010 Mar;117(1):13-20.

[1]. Cao X, Cao Q, Long X, Sun L, Sui M, Zhu C, Zuo XN, Zang Y, Wang Y. Abnormal resting-state functional connectivity patterns of the putamen in medication-naive children with attention deficit hyperactivity disorder. Brain Res. 2009 Dec 15;1303:195-206.

Methodology

[10]. Somandepalli K, Kelly C, Reiss PT, Zuo XN, Craddock RC, Yan CG, Petkova E, Castellanos FX, Milham MP, Di Martino A*. Short-term test-retest reliability and repeatability of resting state fMRI metrics in children with and without attention-deficit/hyperactivity disorder. Dev Cogn Neurosci. 2015; 15:83-93.

[9]. Chen H, Kelly C, Castellanos FX, He Y, Zuo XN, Reiss PT*. Quantile rank maps: a new tool for understanding individual brain development. Neuroimage. 2015; 111: 454-463.

[8]. Zhang ZQ, Liao W, Zuo XN, Wang ZG, Yuan CP, Jiao Q, Chen HF, Biswal BB, Lu GM, Liu YJ. Resting-state brain organization revealed by functional covariance networks. PLoS ONE 6(12): e28817.

[7]. Song XW, Dong ZY, Yan CG, Long XY, Li SF, Zuo XN, He Y, Zhu CZ, Zang YF. REST: A toolkit for resting-state functional magnetic resonance imaging data processing. PLoS One. 2011; 6(9): e25031.

[6]. Reiss PT, Mennes M, Petkova E, Huang L, Hoptman M, Biswal B, Colcombe S, Zuo XN, Milham MP. Extracting information from functional connectivity maps via function-on-scalar regression. Neuroimage. 2011 May 1; 56(1):140-148.

[5]. Wang JH, Zuo XN, Gohel S, Milham MP, Biswal BB, He Y. Graph theoretical analysis of functional brain networks: Test-retest evaluation on short- and long-term resting-state functional MRI data. PLoS ONE. 2011 July 19;6(7): e21976.

[4]. Zhang H, Zuo XN, Ma SY, Zang YF, Milham MP, Zhu CZ. Subject order-independent group ICA (SOI-GICA) for functional MRI data analysis. Neuroimage. 2010 Jul 15;51(4):1414-24.

[3]. Zou QH, Zhu CZ, Yang Y, Zuo XN, Long XY, Cao QJ, Wang YF, Zang YF. An improved approach to detection of amplitude of low-frequency fluctuation (ALFF) for resting-state fMRI: fractional ALFF. J Neurosci Methods. 2008 Jul 15;172(1):137-41.

[2]. Long XY, Zuo XN, Kiviniemi V, Yang Y, Zou QH, Zhu CZ, Jiang TZ, Yang H, Gong QY, Wang L, Li KC, Xie S, Zang YF. Default mode network as revealed with multiple methods for resting-state functional MRI analysis. J Neurosci Methods. 2008 Jun 30;171(2):349-55.

[1]. Huan ZD, Kong LH, Zuo XN. A feature-oriented forward-backward diffusion model for intensity image restoration based on level set motion. Int J Comput Math. 2009; 86(12): 2072-94.